Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm15881-201ENSMUST00000148792 942 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm10731-201ENSMUST00000181171 448 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm28071-201ENSMUST00000190355 478 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col11a1Q61245 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Col11a1Q61245 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Gm6485-201ENSMUST00000160676 439 ntBASIC14.39□□□□□ -0.11
Col11a1Q61245 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Gm10774-201ENSMUST00000188689 204 ntBASIC14.39□□□□□ -0.11
Col11a1Q61245 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.39□□□□□ -0.11
Col11a1Q61245 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.39□□□□□ -0.11
Col11a1Q61245 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col11a1Q61245 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col11a1Q61245 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm14644-201ENSMUST00000116671 647 ntBASIC14.38□□□□□ -0.11
Col11a1Q61245 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.38□□□□□ -0.11
Col11a1Q61245 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm807-202ENSMUST00000224929 408 ntBASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.38□□□□□ -0.11
Col11a1Q61245 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.38□□□□□ -0.11
Col11a1Q61245 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col11a1Q61245 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.37□□□□□ -0.11
Col11a1Q61245 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col11a1Q61245 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms