Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm27772-201ENSMUST00000184900 187 ntBASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm25927-201ENSMUST00000175058 117 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm17330-201ENSMUST00000221047 165 ntBASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.21□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms