Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm14274-201ENSMUST00000117182 615 ntBASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm5733-201ENSMUST00000190232 939 ntBASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm8584-201ENSMUST00000171982 758 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm5340-201ENSMUST00000203733 880 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Gm42518-201ENSMUST00000196277 938 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps13aQ5H8C4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm19994-201ENSMUST00000217086 586 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Gm2517-201ENSMUST00000215651 348 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps13aQ5H8C4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms