Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Gm27023-201ENSMUST00000182372 285 ntBASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Gm44967-201ENSMUST00000207047 631 ntBASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trpm3Q5F4S9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.35■□□□□ 0.21
Trpm3Q5F4S9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Rmrp-201ENSMUST00000157463 271 ntBASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm3Q5F4S9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm9083-201ENSMUST00000120423 819 ntBASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm14999-201ENSMUST00000121039 624 ntBASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm25700-201ENSMUST00000177693 110 ntBASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm3Q5F4S9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms