Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Gm28911-201ENSMUST00000188837 117 ntBASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gm12490-201ENSMUST00000120255 560 ntBASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Syne3Q4FZC9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm13689-201ENSMUST00000119360 685 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm11424-201ENSMUST00000121929 829 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm6983-201ENSMUST00000214912 628 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.96□□□□□ -0.17
Syne3Q4FZC9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne3Q4FZC9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne3Q4FZC9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Syne3Q4FZC9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne3Q4FZC9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne3Q4FZC9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne3Q4FZC9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms