Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38aQ4FK66 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38aQ4FK66 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm3890-201ENSMUST00000182416 207 ntBASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm38158-201ENSMUST00000194617 339 ntBASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm18584-201ENSMUST00000203098 964 ntBASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Olfr284-202ENSMUST00000206647 966 ntBASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm18935-201ENSMUST00000212692 664 ntBASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38aQ4FK66 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Gm13786-201ENSMUST00000122371 333 ntBASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38aQ4FK66 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm14723-201ENSMUST00000118686 215 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm29396-201ENSMUST00000185659 716 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm38266-201ENSMUST00000194931 421 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Gm19931-201ENSMUST00000198920 368 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.31■□□□□ 0.04
Prpf38aQ4FK66 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms