Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm8515-201ENSMUST00000194852 576 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Shd-206ENSMUST00000225145 998 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim80Q3V061 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim80Q3V061 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.6□□□□□ -0.23
Trim80Q3V061 Gm29741-201ENSMUST00000192667 421 ntBASIC13.6□□□□□ -0.23
Trim80Q3V061 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.6□□□□□ -0.23
Trim80Q3V061 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.6□□□□□ -0.23
Trim80Q3V061 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim80Q3V061 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim80Q3V061 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.6□□□□□ -0.23
Trim80Q3V061 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim80Q3V061 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Gm3436-201ENSMUST00000179930 840 ntBASIC13.59□□□□□ -0.23
Trim80Q3V061 Gm29667-201ENSMUST00000190817 490 ntBASIC13.59□□□□□ -0.23
Trim80Q3V061 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim80Q3V061 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim80Q3V061 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms