Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Brf2Q3UAW9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Brf2Q3UAW9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Brf2Q3UAW9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Brf2Q3UAW9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Gm6447-201ENSMUST00000118905 835 ntBASIC12.39□□□□□ -0.43
Brf2Q3UAW9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Brf2Q3UAW9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Brf2Q3UAW9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms