Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC8.97□□□□□ -0.97
Cops9Q3U898 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cops9Q3U898 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.97□□□□□ -0.97
Cops9Q3U898 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cops9Q3U898 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cops9Q3U898 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cops9Q3U898 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm16198-201ENSMUST00000118766 670 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm6539-201ENSMUST00000119157 1064 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm15173-201ENSMUST00000122049 433 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm45841-201ENSMUST00000207700 164 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cops9Q3U898 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Adra1a-206ENSMUST00000225182 2337 ntBASIC8.96□□□□□ -0.98
Cops9Q3U898 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cops9Q3U898 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cops9Q3U898 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.95□□□□□ -0.98
Cops9Q3U898 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.95□□□□□ -0.98
Cops9Q3U898 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cops9Q3U898 Gm15770-201ENSMUST00000117498 584 ntBASIC8.95□□□□□ -0.98
Cops9Q3U898 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC8.95□□□□□ -0.98
Cops9Q3U898 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC8.95□□□□□ -0.98
Cops9Q3U898 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms