Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Nhej1Q3KNJ2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.02□□□□□ -0.16
Nhej1Q3KNJ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm11524-201ENSMUST00000119349 807 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm27306-201ENSMUST00000183970 107 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm37935-201ENSMUST00000192012 982 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm5279-201ENSMUST00000199575 745 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm19078-201ENSMUST00000206311 727 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.02□□□□□ -0.17
Nhej1Q3KNJ2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nhej1Q3KNJ2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nhej1Q3KNJ2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms