Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.77□□□□□ -0.68
Trim63Q38HM4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.68
Trim63Q38HM4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim63Q38HM4 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Gm10653-202ENSMUST00000139570 835 ntBASIC10.77□□□□□ -0.69
Trim63Q38HM4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Mir5130-201ENSMUST00000175160 84 ntBASIC10.77□□□□□ -0.69
Trim63Q38HM4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim63Q38HM4 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Cog3-203ENSMUST00000227473 4197 ntBASIC10.76□□□□□ -0.69
Trim63Q38HM4 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.76□□□□□ -0.69
Trim63Q38HM4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.76□□□□□ -0.69
Trim63Q38HM4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.76□□□□□ -0.69
Trim63Q38HM4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.76□□□□□ -0.69
Trim63Q38HM4 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim63Q38HM4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim63Q38HM4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim63Q38HM4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim63Q38HM4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim63Q38HM4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim63Q38HM4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms