Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf1Q07802 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf1Q07802 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf1Q07802 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm7029-201ENSMUST00000173226 450 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm29396-201ENSMUST00000185659 716 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Cts7-204ENSMUST00000225321 1257 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm10146-201ENSMUST00000072739 309 ntBASIC13.34□□□□□ -0.27
Ebf1Q07802 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.34□□□□□ -0.27
Ebf1Q07802 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf1Q07802 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf1Q07802 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf1Q07802 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf1Q07802 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf1Q07802 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.33□□□□□ -0.27
Ebf1Q07802 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf1Q07802 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Mir877-201ENSMUST00000104738 85 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm13786-201ENSMUST00000122371 333 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm26083-201ENSMUST00000157904 193 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm29199-201ENSMUST00000187766 775 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm37466-201ENSMUST00000195692 652 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm45865-201ENSMUST00000211815 945 ntBASIC13.33□□□□□ -0.28
Ebf1Q07802 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf1Q07802 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf1Q07802 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Ebf1Q07802 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ebf1Q07802 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf1Q07802 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms