Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff2Q03404 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff2Q03404 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff2Q03404 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.4□□□□□ -0.1
Tff2Q03404 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tff2Q03404 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.4□□□□□ -0.1
Tff2Q03404 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.4□□□□□ -0.1
Tff2Q03404 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tff2Q03404 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tff2Q03404 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.39□□□□□ -0.11
Tff2Q03404 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Tff2Q03404 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Tff2Q03404 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.39□□□□□ -0.11
Tff2Q03404 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Gm38092-201ENSMUST00000195600 653 ntBASIC14.39□□□□□ -0.11
Tff2Q03404 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.39□□□□□ -0.11
Tff2Q03404 Gm42997-202ENSMUST00000200321 985 ntBASIC14.39□□□□□ -0.11
Tff2Q03404 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.39□□□□□ -0.11
Tff2Q03404 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Tff2Q03404 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tff2Q03404 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tff2Q03404 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tff2Q03404 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Gm14263-201ENSMUST00000117955 746 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Tff2Q03404 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.38□□□□□ -0.11
Tff2Q03404 Gm22334-201ENSMUST00000158070 133 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tff2Q03404 Gm24514-201ENSMUST00000174961 285 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 Gm25700-201ENSMUST00000177693 110 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 Gm43947-201ENSMUST00000203019 959 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.38□□□□□ -0.11
Tff2Q03404 Gm8712-201ENSMUST00000221090 701 ntBASIC14.38□□□□□ -0.11
Tff2Q03404 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms