Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ginm1-202ENSMUST00000065124 300 ntBASIC18.25■□□□□ 0.51
Xrn1P97789 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.24■□□□□ 0.51
Xrn1P97789 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.24■□□□□ 0.51
Xrn1P97789 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Xrn1P97789 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18.24■□□□□ 0.51
Xrn1P97789 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC18.24■□□□□ 0.51
Xrn1P97789 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Gm44958-201ENSMUST00000203734 736 ntBASIC18.24■□□□□ 0.51
Xrn1P97789 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.24■□□□□ 0.51
Xrn1P97789 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Xrn1P97789 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Gm12029-201ENSMUST00000120073 832 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.23■□□□□ 0.51
Xrn1P97789 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 Gm15595-201ENSMUST00000120840 961 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Gm37905-201ENSMUST00000195310 341 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Gm43830-201ENSMUST00000198760 1067 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Gm9785-201ENSMUST00000062642 1006 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Xrn1P97789 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Xrn1P97789 AC122314.1-201ENSMUST00000223056 2239 ntBASIC18.23■□□□□ 0.51
Xrn1P97789 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Xrn1P97789 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.22■□□□□ 0.51
Xrn1P97789 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.22■□□□□ 0.51
Xrn1P97789 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Xrn1P97789 Gm4482-201ENSMUST00000200876 742 ntBASIC18.22■□□□□ 0.51
Xrn1P97789 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
Xrn1P97789 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Xrn1P97789 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Xrn1P97789 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC18.22■□□□□ 0.51
Xrn1P97789 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms