Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm24845-201ENSMUST00000158034 109 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm25700-201ENSMUST00000177693 110 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm44262-201ENSMUST00000204969 372 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.41■□□□□ 0.22
Nkx2-3P97334 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-3P97334 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 Matn2-206ENSMUST00000228570 2798 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gm5904-201ENSMUST00000210286 865 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.4■□□□□ 0.22
Nkx2-3P97334 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-3P97334 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.39■□□□□ 0.22
Nkx2-3P97334 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nkx2-3P97334 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Nkx2-3P97334 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm12217-201ENSMUST00000118858 696 ntBASIC16.39■□□□□ 0.21
Nkx2-3P97334 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Mir3547-201ENSMUST00000175461 88 ntBASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm19931-201ENSMUST00000198920 368 ntBASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm44405-201ENSMUST00000198952 126 ntBASIC16.39■□□□□ 0.21
Nkx2-3P97334 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-3P97334 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms