Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm7561-201ENSMUST00000211203 886 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim43cP86449 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim43cP86449 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Trim43cP86449 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43cP86449 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.29□□□□□ -0.12
Trim43cP86449 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Gm16202-201ENSMUST00000117532 544 ntBASIC14.28□□□□□ -0.12
Trim43cP86449 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Gm11814-201ENSMUST00000119515 929 ntBASIC14.28□□□□□ -0.12
Trim43cP86449 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.28□□□□□ -0.12
Trim43cP86449 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.28□□□□□ -0.12
Trim43cP86449 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trim43cP86449 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43cP86449 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim43cP86449 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim43cP86449 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43cP86449 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trim43cP86449 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim43cP86449 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43cP86449 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim43cP86449 Gm28693-202ENSMUST00000190758 331 ntBASIC14.27□□□□□ -0.13
Trim43cP86449 Gm37497-201ENSMUST00000195830 798 ntBASIC14.27□□□□□ -0.13
Trim43cP86449 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim43cP86449 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim43cP86449 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.27□□□□□ -0.13
Trim43cP86449 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim43cP86449 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trim43cP86449 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim43cP86449 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43cP86449 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim43cP86449 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trim43cP86449 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms