Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcbP82349 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gm22331-201ENSMUST00000158066 136 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
SgcbP82349 Gm8810-201ENSMUST00000172895 754 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gm6266-201ENSMUST00000203844 806 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcbP82349 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gm6091-201ENSMUST00000098307 165 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SgcbP82349 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcbP82349 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.74□□□□□ -0.53
SgcbP82349 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.74□□□□□ -0.53
SgcbP82349 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.74□□□□□ -0.53
SgcbP82349 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcbP82349 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gm8213-201ENSMUST00000118191 441 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Gm13829-201ENSMUST00000119600 138 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Gm11803-201ENSMUST00000119966 444 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.73□□□□□ -0.53
SgcbP82349 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.73□□□□□ -0.53
SgcbP82349 Gm24644-201ENSMUST00000157114 139 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.73□□□□□ -0.53
SgcbP82349 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.73□□□□□ -0.53
SgcbP82349 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
SgcbP82349 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcbP82349 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcbP82349 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
SgcbP82349 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcbP82349 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms