Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CiitaP79621 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.22□□□□□ -0.13
CiitaP79621 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CiitaP79621 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.22□□□□□ -0.13
CiitaP79621 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.22□□□□□ -0.13
CiitaP79621 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.22□□□□□ -0.13
CiitaP79621 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CiitaP79621 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CiitaP79621 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CiitaP79621 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.22□□□□□ -0.13
CiitaP79621 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CiitaP79621 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.22□□□□□ -0.13
CiitaP79621 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CiitaP79621 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CiitaP79621 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.21□□□□□ -0.13
CiitaP79621 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Gm15198-201ENSMUST00000117283 177 ntBASIC14.21□□□□□ -0.13
CiitaP79621 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.21□□□□□ -0.13
CiitaP79621 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.21□□□□□ -0.13
CiitaP79621 Gm7809-201ENSMUST00000153199 742 ntBASIC14.21□□□□□ -0.13
CiitaP79621 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.21□□□□□ -0.13
CiitaP79621 Gm17208-201ENSMUST00000168388 535 ntBASIC14.21□□□□□ -0.13
CiitaP79621 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.21□□□□□ -0.13
CiitaP79621 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.21□□□□□ -0.13
CiitaP79621 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CiitaP79621 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CiitaP79621 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CiitaP79621 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CiitaP79621 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.21□□□□□ -0.14
CiitaP79621 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CiitaP79621 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CiitaP79621 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.21□□□□□ -0.14
CiitaP79621 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CiitaP79621 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.21□□□□□ -0.14
CiitaP79621 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CiitaP79621 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.2□□□□□ -0.14
CiitaP79621 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CiitaP79621 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CiitaP79621 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.2□□□□□ -0.14
CiitaP79621 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CiitaP79621 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms