Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rad50P70388 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rad50P70388 Rubie-203ENSMUST00000227803 2430 ntBASIC15.8■□□□□ 0.12
Rad50P70388 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rad50P70388 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.79■□□□□ 0.12
Rad50P70388 Gm14660-201ENSMUST00000119809 575 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.79■□□□□ 0.12
Rad50P70388 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rad50P70388 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rad50P70388 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rad50P70388 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.79■□□□□ 0.12
Rad50P70388 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rad50P70388 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rad50P70388 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rad50P70388 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Rad50P70388 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.78■□□□□ 0.12
Rad50P70388 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.78■□□□□ 0.12
Rad50P70388 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.78■□□□□ 0.12
Rad50P70388 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.78■□□□□ 0.12
Rad50P70388 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.78■□□□□ 0.12
Rad50P70388 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.78■□□□□ 0.12
Rad50P70388 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.78■□□□□ 0.12
Rad50P70388 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Rad50P70388 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rad50P70388 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rad50P70388 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.78■□□□□ 0.12
Rad50P70388 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rad50P70388 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.78■□□□□ 0.12
Rad50P70388 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rad50P70388 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rad50P70388 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Gm5687-201ENSMUST00000118252 640 ntBASIC15.77■□□□□ 0.12
Rad50P70388 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.77■□□□□ 0.12
Rad50P70388 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.77■□□□□ 0.12
Rad50P70388 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.77■□□□□ 0.12
Rad50P70388 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rad50P70388 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Rad50P70388 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.77■□□□□ 0.12
Rad50P70388 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rad50P70388 Gm27731-201ENSMUST00000185192 107 ntBASIC15.77■□□□□ 0.12
Rad50P70388 Gm29127-201ENSMUST00000188304 517 ntBASIC15.77■□□□□ 0.12
Rad50P70388 Gm19931-201ENSMUST00000198920 368 ntBASIC15.77■□□□□ 0.12
Rad50P70388 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.77■□□□□ 0.12
Rad50P70388 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.77■□□□□ 0.12
Rad50P70388 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms