Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx1P63006 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Mir686-201ENSMUST00000102174 109 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Gm5187-201ENSMUST00000117317 991 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Mir1938-201ENSMUST00000158746 100 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.9□□□□□ -0.34
Lhx1P63006 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Gm19163-201ENSMUST00000223313 780 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Gm10478-201ENSMUST00000084451 396 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.9□□□□□ -0.34
Lhx1P63006 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lhx1P63006 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx1P63006 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Lhx1P63006 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx1P63006 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx1P63006 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lhx1P63006 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.89□□□□□ -0.35
Lhx1P63006 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Lhx1P63006 Gm16379-201ENSMUST00000161469 348 ntBASIC12.89□□□□□ -0.35
Lhx1P63006 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Gm8762-201ENSMUST00000193486 339 ntBASIC12.89□□□□□ -0.35
Lhx1P63006 Gm37042-201ENSMUST00000193816 581 ntBASIC12.89□□□□□ -0.35
Lhx1P63006 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.89□□□□□ -0.35
Lhx1P63006 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.89□□□□□ -0.35
Lhx1P63006 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.89□□□□□ -0.35
Lhx1P63006 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Lhx1P63006 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lhx1P63006 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lhx1P63006 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Gm13392-201ENSMUST00000117708 150 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms