Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Lsm5P62322 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Lsm5P62322 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm5P62322 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.92□□□□□ -0.66
Lsm5P62322 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Gm15770-201ENSMUST00000117498 584 ntBASIC10.92□□□□□ -0.66
Lsm5P62322 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.92□□□□□ -0.66
Lsm5P62322 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.92□□□□□ -0.66
Lsm5P62322 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.92□□□□□ -0.66
Lsm5P62322 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Lsm5P62322 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lsm5P62322 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm5P62322 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Lsm5P62322 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.91□□□□□ -0.66
Lsm5P62322 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.91□□□□□ -0.66
Lsm5P62322 Gm9103-201ENSMUST00000119371 405 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Gm12350-201ENSMUST00000121208 462 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.91□□□□□ -0.66
Lsm5P62322 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.91□□□□□ -0.66
Lsm5P62322 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.91□□□□□ -0.66
Lsm5P62322 Gm28659-201ENSMUST00000188013 759 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lsm5P62322 Gm20553-201ENSMUST00000204205 844 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Gm6916-202ENSMUST00000205523 195 ntBASIC10.91□□□□□ -0.66
Lsm5P62322 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm5P62322 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms