Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.95□□□□□ -0.5
Lsm3P62311 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lsm3P62311 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm6973-201ENSMUST00000117080 721 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Gm7862-201ENSMUST00000121461 292 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Gm5364-201ENSMUST00000216789 889 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm3P62311 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm3P62311 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Lsm3P62311 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.95□□□□□ -0.5
Lsm3P62311 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.95□□□□□ -0.5
Lsm3P62311 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm3P62311 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm3P62311 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm3P62311 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm3P62311 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm3P62311 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm3P62311 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Lsm3P62311 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Gm11543-201ENSMUST00000120758 370 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 AA619741-201ENSMUST00000195095 646 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm3P62311 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lsm3P62311 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lsm3P62311 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.94□□□□□ -0.5
Lsm3P62311 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm3P62311 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm3P62311 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lsm3P62311 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms