Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Tpm1P58771 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tpm1P58771 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Tpm1P58771 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.67□□□□□ -0.06
Tpm1P58771 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tpm1P58771 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Tpm1P58771 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tpm1P58771 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Matn2-203ENSMUST00000226766 3252 ntBASIC14.67□□□□□ -0.06
Tpm1P58771 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Tpm1P58771 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Tpm1P58771 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Gm12585-201ENSMUST00000117307 290 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.66□□□□□ -0.06
Tpm1P58771 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Gm46209-201ENSMUST00000217912 553 ntBASIC14.66□□□□□ -0.06
Tpm1P58771 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.66□□□□□ -0.06
Tpm1P58771 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Tpm1P58771 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Tpm1P58771 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tpm1P58771 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Tpm1P58771 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Tpm1P58771 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tpm1P58771 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.65□□□□□ -0.06
Tpm1P58771 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.65□□□□□ -0.06
Tpm1P58771 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.65□□□□□ -0.06
Tpm1P58771 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.65□□□□□ -0.06
Tpm1P58771 Shd-206ENSMUST00000225145 998 ntBASIC14.65□□□□□ -0.06
Tpm1P58771 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.65□□□□□ -0.06
Tpm1P58771 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tpm1P58771 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms