Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm15276-201ENSMUST00000145953 498 ntBASIC16.54■□□□□ 0.24
Msh6P54276 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msh6P54276 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Msh6P54276 Gm8885-201ENSMUST00000189382 598 ntBASIC16.54■□□□□ 0.24
Msh6P54276 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Msh6P54276 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.54■□□□□ 0.24
Msh6P54276 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Msh6P54276 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.54■□□□□ 0.24
Msh6P54276 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.54■□□□□ 0.24
Msh6P54276 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.54■□□□□ 0.24
Msh6P54276 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.54■□□□□ 0.24
Msh6P54276 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh6P54276 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh6P54276 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Msh6P54276 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Gm5950-201ENSMUST00000213337 772 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Msh6P54276 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.53■□□□□ 0.24
Msh6P54276 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Msh6P54276 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Msh6P54276 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh6P54276 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Gm14130-201ENSMUST00000118417 987 ntBASIC16.52■□□□□ 0.24
Msh6P54276 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.52■□□□□ 0.24
Msh6P54276 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.52■□□□□ 0.24
Msh6P54276 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.52■□□□□ 0.24
Msh6P54276 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.52■□□□□ 0.24
Msh6P54276 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.52■□□□□ 0.24
Msh6P54276 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Msh6P54276 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Msh6P54276 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Msh6P54276 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Msh6P54276 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh6P54276 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh6P54276 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh6P54276 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh6P54276 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh6P54276 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Msh6P54276 Gm12502-201ENSMUST00000120197 444 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Gm13665-201ENSMUST00000120830 528 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Gm25732-201ENSMUST00000175168 60 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.51■□□□□ 0.23
Msh6P54276 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Msh6P54276 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh6P54276 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms