Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
GdnfP48540 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.54□□□□□ -0.56
GdnfP48540 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
GdnfP48540 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.54□□□□□ -0.56
GdnfP48540 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Gm15393-201ENSMUST00000120499 219 ntBASIC11.54□□□□□ -0.56
GdnfP48540 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.54□□□□□ -0.56
GdnfP48540 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.54□□□□□ -0.56
GdnfP48540 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.54□□□□□ -0.56
GdnfP48540 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.54□□□□□ -0.56
GdnfP48540 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.54□□□□□ -0.56
GdnfP48540 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.54□□□□□ -0.56
GdnfP48540 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
GdnfP48540 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.53□□□□□ -0.56
GdnfP48540 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
GdnfP48540 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
GdnfP48540 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
GdnfP48540 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
GdnfP48540 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.53□□□□□ -0.56
GdnfP48540 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
GdnfP48540 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.53□□□□□ -0.56
GdnfP48540 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
GdnfP48540 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.53□□□□□ -0.56
GdnfP48540 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.53□□□□□ -0.56
GdnfP48540 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GdnfP48540 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.52□□□□□ -0.56
GdnfP48540 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
GdnfP48540 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GdnfP48540 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms