Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.59□□□□□ -0.39
Tnfsf9P41274 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.59□□□□□ -0.39
Tnfsf9P41274 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf9P41274 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf9P41274 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf9P41274 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf9P41274 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf9P41274 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf9P41274 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Tnfsf9P41274 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Tnfsf9P41274 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.58□□□□□ -0.4
Tnfsf9P41274 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm45880-201ENSMUST00000213041 853 ntBASIC12.58□□□□□ -0.4
Tnfsf9P41274 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.58□□□□□ -0.4
Tnfsf9P41274 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf9P41274 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm37008-201ENSMUST00000195712 319 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.57□□□□□ -0.4
Tnfsf9P41274 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf9P41274 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms