Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox6P40645 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Gm7730-201ENSMUST00000212486 454 ntBASIC12.36□□□□□ -0.43
Sox6P40645 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.36□□□□□ -0.43
Sox6P40645 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.36□□□□□ -0.43
Sox6P40645 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.36□□□□□ -0.43
Sox6P40645 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.36□□□□□ -0.43
Sox6P40645 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Sox6P40645 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox6P40645 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Gm15321-201ENSMUST00000121290 288 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Gm27437-201ENSMUST00000183429 107 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Gm18905-201ENSMUST00000205454 928 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Gm17795-201ENSMUST00000214505 757 ntBASIC12.35□□□□□ -0.43
Sox6P40645 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Gm9797-201ENSMUST00000052902 613 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.35□□□□□ -0.43
Sox6P40645 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Pck2-205ENSMUST00000226352 2784 ntBASIC12.35□□□□□ -0.43
Sox6P40645 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox6P40645 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox6P40645 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.34□□□□□ -0.43
Sox6P40645 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox6P40645 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox6P40645 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Sox6P40645 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms