Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm14928-201ENSMUST00000120198 477 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.2□□□□□ -0.46
Thbs1P35441 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm44397-201ENSMUST00000195950 113 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm6983-201ENSMUST00000214912 628 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.2□□□□□ -0.46
Thbs1P35441 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Thbs1P35441 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.2□□□□□ -0.46
Thbs1P35441 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.2□□□□□ -0.46
Thbs1P35441 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs1P35441 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs1P35441 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Thbs1P35441 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs1P35441 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.19□□□□□ -0.46
Thbs1P35441 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Mir7654-201ENSMUST00000185082 70 ntBASIC12.19□□□□□ -0.46
Thbs1P35441 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.19□□□□□ -0.46
Thbs1P35441 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.19□□□□□ -0.46
Thbs1P35441 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Thbs1P35441 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.19□□□□□ -0.46
Thbs1P35441 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Thbs1P35441 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Thbs1P35441 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.18□□□□□ -0.46
Thbs1P35441 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Thbs1P35441 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Thbs1P35441 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Thbs1P35441 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms