Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sftpa1P35242 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sftpa1P35242 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Sftpa1P35242 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sftpa1P35242 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Gm2546-201ENSMUST00000182630 991 ntBASIC12.12□□□□□ -0.47
Sftpa1P35242 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sftpa1P35242 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sftpa1P35242 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.11□□□□□ -0.47
Sftpa1P35242 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Gm25732-201ENSMUST00000175168 60 ntBASIC12.11□□□□□ -0.47
Sftpa1P35242 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Gm44262-201ENSMUST00000204969 372 ntBASIC12.11□□□□□ -0.47
Sftpa1P35242 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sftpa1P35242 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sftpa1P35242 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Snord83b-201ENSMUST00000104546 94 ntBASIC12.1□□□□□ -0.47
Sftpa1P35242 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.1□□□□□ -0.47
Sftpa1P35242 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sftpa1P35242 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.1□□□□□ -0.47
Sftpa1P35242 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sftpa1P35242 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms