Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nedd8P29595 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.11□□□□□ -0.47
Nedd8P29595 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nedd8P29595 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nedd8P29595 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.11□□□□□ -0.47
Nedd8P29595 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.11□□□□□ -0.47
Nedd8P29595 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nedd8P29595 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.11□□□□□ -0.47
Nedd8P29595 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nedd8P29595 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.11□□□□□ -0.47
Nedd8P29595 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Gm45841-201ENSMUST00000207700 164 ntBASIC12.11□□□□□ -0.47
Nedd8P29595 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.11□□□□□ -0.47
Nedd8P29595 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.11□□□□□ -0.47
Nedd8P29595 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nedd8P29595 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Rps4l-201ENSMUST00000071745 943 ntBASIC12.11□□□□□ -0.47
Nedd8P29595 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nedd8P29595 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nedd8P29595 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nedd8P29595 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nedd8P29595 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.1□□□□□ -0.47
Nedd8P29595 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Gm14859-201ENSMUST00000117752 357 ntBASIC12.1□□□□□ -0.47
Nedd8P29595 Gm11543-201ENSMUST00000120758 370 ntBASIC12.1□□□□□ -0.47
Nedd8P29595 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.1□□□□□ -0.47
Nedd8P29595 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nedd8P29595 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nedd8P29595 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nedd8P29595 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nedd8P29595 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.1□□□□□ -0.47
Nedd8P29595 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.1□□□□□ -0.47
Nedd8P29595 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nedd8P29595 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.1□□□□□ -0.47
Nedd8P29595 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms