Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp3P28862 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.03□□□□□ -0.16
Mmp3P28862 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.03□□□□□ -0.16
Mmp3P28862 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp3P28862 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.02□□□□□ -0.16
Mmp3P28862 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.02□□□□□ -0.16
Mmp3P28862 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.02□□□□□ -0.16
Mmp3P28862 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Mmp3P28862 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.02□□□□□ -0.16
Mmp3P28862 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp3P28862 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Mir874-201ENSMUST00000104769 76 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Mmp3P28862 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.02□□□□□ -0.17
Mmp3P28862 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Mmp3P28862 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.02□□□□□ -0.17
Mmp3P28862 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Morn2-202ENSMUST00000227729 656 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Mmp3P28862 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.02□□□□□ -0.17
Mmp3P28862 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Mmp3P28862 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp3P28862 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.01□□□□□ -0.17
Mmp3P28862 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.01□□□□□ -0.17
Mmp3P28862 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.01□□□□□ -0.17
Mmp3P28862 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp3P28862 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp3P28862 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Mmp3P28862 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Mmp3P28862 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Mmp3P28862 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Acot6-202ENSMUST00000222921 3622 ntBASIC14□□□□□ -0.17
Mmp3P28862 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp3P28862 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Mmp3P28862 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms