Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Col8a2P25318 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Col8a2P25318 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm27514-201ENSMUST00000183692 110 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm45841-201ENSMUST00000207700 164 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 Gm6007-201ENSMUST00000208170 823 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Col8a2P25318 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Col8a2P25318 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col8a2P25318 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Col8a2P25318 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Gm11978-201ENSMUST00000122315 466 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.96□□□□□ -0.65
Col8a2P25318 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.96□□□□□ -0.65
Col8a2P25318 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.96□□□□□ -0.65
Col8a2P25318 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.96□□□□□ -0.65
Col8a2P25318 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Gm18054-201ENSMUST00000207539 555 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.96□□□□□ -0.65
Col8a2P25318 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Col8a2P25318 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col8a2P25318 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col8a2P25318 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.96□□□□□ -0.66
Col8a2P25318 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.96□□□□□ -0.66
Col8a2P25318 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.66
Col8a2P25318 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.96□□□□□ -0.66
Col8a2P25318 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.96□□□□□ -0.66
Col8a2P25318 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.96□□□□□ -0.66
Col8a2P25318 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col8a2P25318 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Col8a2P25318 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.95□□□□□ -0.66
Col8a2P25318 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms