Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pde6bP23440 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pde6bP23440 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.38□□□□□ -0.11
Pde6bP23440 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pde6bP23440 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.37□□□□□ -0.11
Pde6bP23440 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6bP23440 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm25927-201ENSMUST00000175058 117 ntBASIC14.37□□□□□ -0.11
Pde6bP23440 Gm27516-201ENSMUST00000184237 98 ntBASIC14.37□□□□□ -0.11
Pde6bP23440 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm43118-201ENSMUST00000199149 775 ntBASIC14.37□□□□□ -0.11
Pde6bP23440 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pde6bP23440 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.37□□□□□ -0.11
Pde6bP23440 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pde6bP23440 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.37□□□□□ -0.11
Pde6bP23440 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pde6bP23440 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
Pde6bP23440 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
Pde6bP23440 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pde6bP23440 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.36□□□□□ -0.11
Pde6bP23440 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.36□□□□□ -0.11
Pde6bP23440 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Pde6bP23440 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.36□□□□□ -0.11
Pde6bP23440 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.36□□□□□ -0.11
Pde6bP23440 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Pde6bP23440 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Pde6bP23440 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.36□□□□□ -0.11
Pde6bP23440 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pde6bP23440 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pde6bP23440 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pde6bP23440 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms