Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.93■□□□□ 0.3
Hoxc9P09633 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Mir3547-201ENSMUST00000175461 88 ntBASIC16.93■□□□□ 0.3
Hoxc9P09633 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.93■□□□□ 0.3
Hoxc9P09633 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.93■□□□□ 0.3
Hoxc9P09633 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc9P09633 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.93■□□□□ 0.3
Hoxc9P09633 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc9P09633 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.92■□□□□ 0.3
Hoxc9P09633 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Gm4909-201ENSMUST00000118749 794 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Gm14208-201ENSMUST00000119645 678 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Hoxc9P09633 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hoxc9P09633 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Gm3096-201ENSMUST00000185770 364 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Gm45925-201ENSMUST00000218882 744 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Mir339-201ENSMUST00000083659 96 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.92■□□□□ 0.3
Hoxc9P09633 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc9P09633 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hoxc9P09633 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hoxc9P09633 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.91■□□□□ 0.3
Hoxc9P09633 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Gm16296-201ENSMUST00000159905 325 ntBASIC16.91■□□□□ 0.3
Hoxc9P09633 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.91■□□□□ 0.3
Hoxc9P09633 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.91■□□□□ 0.3
Hoxc9P09633 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.91■□□□□ 0.3
Hoxc9P09633 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.91■□□□□ 0.3
Hoxc9P09633 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hoxc9P09633 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc9P09633 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.9■□□□□ 0.3
Hoxc9P09633 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Mir5120-201ENSMUST00000175020 78 ntBASIC16.9■□□□□ 0.3
Hoxc9P09633 Gm43138-201ENSMUST00000199123 708 ntBASIC16.9■□□□□ 0.3
Hoxc9P09633 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms