Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm14028-201ENSMUST00000117434 479 ntBASIC12.28□□□□□ -0.44
Sod1P08228 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.28□□□□□ -0.44
Sod1P08228 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sod1P08228 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm3096-201ENSMUST00000185770 364 ntBASIC12.28□□□□□ -0.44
Sod1P08228 Gm44405-201ENSMUST00000198952 126 ntBASIC12.28□□□□□ -0.44
Sod1P08228 Gm3786-201ENSMUST00000202659 378 ntBASIC12.28□□□□□ -0.44
Sod1P08228 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm45925-201ENSMUST00000218882 744 ntBASIC12.28□□□□□ -0.44
Sod1P08228 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.28□□□□□ -0.44
Sod1P08228 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sod1P08228 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sod1P08228 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.28□□□□□ -0.44
Sod1P08228 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.28□□□□□ -0.44
Sod1P08228 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.28□□□□□ -0.44
Sod1P08228 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sod1P08228 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Sod1P08228 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Sod1P08228 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.27□□□□□ -0.44
Sod1P08228 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.27□□□□□ -0.44
Sod1P08228 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sod1P08228 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.27□□□□□ -0.45
Sod1P08228 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gm4909-201ENSMUST00000118749 794 ntBASIC12.27□□□□□ -0.45
Sod1P08228 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.27□□□□□ -0.45
Sod1P08228 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.27□□□□□ -0.45
Sod1P08228 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Sod1P08228 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.27□□□□□ -0.45
Sod1P08228 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.27□□□□□ -0.45
Sod1P08228 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sod1P08228 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.27□□□□□ -0.45
Sod1P08228 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.27□□□□□ -0.45
Sod1P08228 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sod1P08228 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.26□□□□□ -0.45
Sod1P08228 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.26□□□□□ -0.45
Sod1P08228 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sod1P08228 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.26□□□□□ -0.45
Sod1P08228 Gm16296-201ENSMUST00000159905 325 ntBASIC12.26□□□□□ -0.45
Sod1P08228 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sod1P08228 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sod1P08228 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sod1P08228 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms