Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.98□□□□□ -0.65
CfdP03953 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CfdP03953 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.98□□□□□ -0.65
CfdP03953 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.98□□□□□ -0.65
CfdP03953 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.98□□□□□ -0.65
CfdP03953 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CfdP03953 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.98□□□□□ -0.65
CfdP03953 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.98□□□□□ -0.65
CfdP03953 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.98□□□□□ -0.65
CfdP03953 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CfdP03953 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CfdP03953 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.98□□□□□ -0.65
CfdP03953 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.98□□□□□ -0.65
CfdP03953 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CfdP03953 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CfdP03953 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CfdP03953 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Gm24543-201ENSMUST00000103867 82 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm12403-201ENSMUST00000121384 959 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.97□□□□□ -0.65
CfdP03953 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.97□□□□□ -0.65
CfdP03953 Gm18889-201ENSMUST00000174284 929 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.97□□□□□ -0.65
CfdP03953 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CfdP03953 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CfdP03953 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.97□□□□□ -0.65
CfdP03953 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.97□□□□□ -0.65
CfdP03953 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CfdP03953 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CfdP03953 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CfdP03953 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.96□□□□□ -0.65
CfdP03953 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.96□□□□□ -0.65
CfdP03953 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.96□□□□□ -0.65
CfdP03953 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.96□□□□□ -0.65
CfdP03953 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.96□□□□□ -0.65
CfdP03953 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.96□□□□□ -0.65
CfdP03953 Gm25287-201ENSMUST00000103846 110 ntBASIC10.96□□□□□ -0.65
CfdP03953 Gm22918-201ENSMUST00000103855 110 ntBASIC10.96□□□□□ -0.65
CfdP03953 Mir1897-201ENSMUST00000122581 272 ntBASIC10.96□□□□□ -0.65
CfdP03953 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms