Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.84■□□□□ 0.13
Col4a1P02463 Gm5070-201ENSMUST00000177599 862 ntBASIC15.84■□□□□ 0.13
Col4a1P02463 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col4a1P02463 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.84■□□□□ 0.13
Col4a1P02463 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col4a1P02463 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col4a1P02463 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.84■□□□□ 0.13
Col4a1P02463 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col4a1P02463 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Col4a1P02463 Gm14921-201ENSMUST00000118643 908 ntBASIC15.83■□□□□ 0.13
Col4a1P02463 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.83■□□□□ 0.13
Col4a1P02463 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.83■□□□□ 0.13
Col4a1P02463 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.83■□□□□ 0.13
Col4a1P02463 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.83■□□□□ 0.13
Col4a1P02463 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a1P02463 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.83■□□□□ 0.12
Col4a1P02463 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.83■□□□□ 0.12
Col4a1P02463 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col4a1P02463 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Col4a1P02463 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.83■□□□□ 0.12
Col4a1P02463 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Gm15703-201ENSMUST00000120250 880 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Gm5523-201ENSMUST00000180415 997 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a1P02463 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Col4a1P02463 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 Gm5369-201ENSMUST00000217499 588 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.83■□□□□ 0.12
Col4a1P02463 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col4a1P02463 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.82■□□□□ 0.12
Col4a1P02463 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a1P02463 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a1P02463 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Gm12015-201ENSMUST00000117065 843 ntBASIC15.82■□□□□ 0.12
Col4a1P02463 Gm13296-201ENSMUST00000117854 997 ntBASIC15.82■□□□□ 0.12
Col4a1P02463 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.82■□□□□ 0.12
Col4a1P02463 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col4a1P02463 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.82■□□□□ 0.12
Col4a1P02463 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col4a1P02463 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.82■□□□□ 0.12
Col4a1P02463 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a1P02463 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col4a1P02463 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.81■□□□□ 0.12
Col4a1P02463 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a1P02463 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms