Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
TcraP01849 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.59□□□□□ -0.87
TcraP01849 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
TcraP01849 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.59□□□□□ -0.87
TcraP01849 Rpph1-201ENSMUST00000175096 319 ntBASIC9.59□□□□□ -0.87
TcraP01849 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.59□□□□□ -0.87
TcraP01849 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.59□□□□□ -0.87
TcraP01849 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.59□□□□□ -0.87
TcraP01849 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
TcraP01849 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.59□□□□□ -0.87
TcraP01849 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.59□□□□□ -0.87
TcraP01849 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.88
TcraP01849 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.88
TcraP01849 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
TcraP01849 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
TcraP01849 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.88
TcraP01849 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.58□□□□□ -0.88
TcraP01849 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.58□□□□□ -0.88
TcraP01849 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Gm8000-201ENSMUST00000188378 592 ntBASIC9.58□□□□□ -0.88
TcraP01849 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.58□□□□□ -0.88
TcraP01849 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.58□□□□□ -0.88
TcraP01849 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.58□□□□□ -0.88
TcraP01849 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.58□□□□□ -0.88
TcraP01849 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TcraP01849 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
TcraP01849 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms