Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Mir686-201ENSMUST00000102174 109 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Gm6180-201ENSMUST00000065243 498 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Igh-VJ558P01758 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm13612-201ENSMUST00000119276 390 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm14928-201ENSMUST00000120198 477 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm8598-201ENSMUST00000221184 836 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm16372-201ENSMUST00000073088 450 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igh-VJ558P01758 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Gm12091-201ENSMUST00000146791 830 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Gm23984-201ENSMUST00000157139 203 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igh-VJ558P01758 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Gm8515-201ENSMUST00000194852 576 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Gm7287-201ENSMUST00000205267 602 ntBASIC11.34□□□□□ -0.59
Igh-VJ558P01758 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms