Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm3890-201ENSMUST00000182416 207 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Mir8109-201ENSMUST00000184375 117 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm29396-201ENSMUST00000185659 716 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm43822-201ENSMUST00000200285 476 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm18584-201ENSMUST00000203098 964 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm3961-201ENSMUST00000204425 994 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.09□□□□□ -0.63
Cxcl13O55038 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Gm19931-201ENSMUST00000198920 368 ntBASIC11.09□□□□□ -0.63
Cxcl13O55038 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cxcl13O55038 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cxcl13O55038 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Cxcl13O55038 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.08□□□□□ -0.63
Cxcl13O55038 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cxcl13O55038 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Gm13786-201ENSMUST00000122371 333 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Gm10608-202ENSMUST00000213924 676 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl13O55038 Gm9368-201ENSMUST00000219348 831 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 Gm5781-201ENSMUST00000219792 443 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl13O55038 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.08□□□□□ -0.64
Cxcl13O55038 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms