Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.93□□□□□ -0.5
Rnf13O54965 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf13O54965 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf13O54965 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.93□□□□□ -0.5
Rnf13O54965 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Rnf13O54965 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Rnf13O54965 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm27618-201ENSMUST00000183671 60 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Gm17837-201ENSMUST00000186435 985 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm38294-201ENSMUST00000192831 381 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.92□□□□□ -0.5
Rnf13O54965 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rnf13O54965 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf13O54965 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf13O54965 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf13O54965 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf13O54965 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf13O54965 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf13O54965 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Rnf13O54965 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rnf13O54965 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm12403-201ENSMUST00000121384 959 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf13O54965 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.91□□□□□ -0.5
Rnf13O54965 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms