Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.95□□□□□ -0.5
Matn3O35701 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Matn3O35701 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Matn3O35701 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Matn3O35701 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Matn3O35701 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Matn3O35701 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.95□□□□□ -0.5
Matn3O35701 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.94□□□□□ -0.5
Matn3O35701 Gm14057-201ENSMUST00000120631 482 ntBASIC11.94□□□□□ -0.5
Matn3O35701 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.94□□□□□ -0.5
Matn3O35701 Mir6956-201ENSMUST00000183598 62 ntBASIC11.94□□□□□ -0.5
Matn3O35701 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Gm5312-201ENSMUST00000203728 547 ntBASIC11.94□□□□□ -0.5
Matn3O35701 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Matn3O35701 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.94□□□□□ -0.5
Matn3O35701 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.94□□□□□ -0.5
Matn3O35701 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Matn3O35701 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Matn3O35701 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Matn3O35701 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.94□□□□□ -0.5
Matn3O35701 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Matn3O35701 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.93□□□□□ -0.5
Matn3O35701 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.93□□□□□ -0.5
Matn3O35701 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.93□□□□□ -0.5
Matn3O35701 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.93□□□□□ -0.5
Matn3O35701 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Matn3O35701 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Matn3O35701 Mir125a-201ENSMUST00000083545 68 ntBASIC11.93□□□□□ -0.5
Matn3O35701 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.93□□□□□ -0.5
Matn3O35701 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms