Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Stx1aO35526 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Stx1aO35526 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.78□□□□□ -0.04
Stx1aO35526 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.78□□□□□ -0.04
Stx1aO35526 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Stx1aO35526 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Stx1aO35526 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stx1aO35526 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
Stx1aO35526 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Stx1aO35526 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stx1aO35526 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.77□□□□□ -0.05
Stx1aO35526 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Gm12485-201ENSMUST00000119641 291 ntBASIC14.77□□□□□ -0.05
Stx1aO35526 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.77□□□□□ -0.05
Stx1aO35526 Gm27430-201ENSMUST00000184585 107 ntBASIC14.77□□□□□ -0.05
Stx1aO35526 Gm38144-201ENSMUST00000192790 465 ntBASIC14.77□□□□□ -0.05
Stx1aO35526 Gm44333-201ENSMUST00000197168 107 ntBASIC14.77□□□□□ -0.05
Stx1aO35526 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.77□□□□□ -0.05
Stx1aO35526 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.77□□□□□ -0.05
Stx1aO35526 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.77□□□□□ -0.05
Stx1aO35526 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Stx1aO35526 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Stx1aO35526 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Stx1aO35526 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Stx1aO35526 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Stx1aO35526 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stx1aO35526 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Stx1aO35526 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.76□□□□□ -0.05
Stx1aO35526 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.76□□□□□ -0.05
Stx1aO35526 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Stx1aO35526 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.76□□□□□ -0.05
Stx1aO35526 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Stx1aO35526 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Stx1aO35526 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Stx1aO35526 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Stx1aO35526 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stx1aO35526 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.75□□□□□ -0.05
Stx1aO35526 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stx1aO35526 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stx1aO35526 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stx1aO35526 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Stx1aO35526 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stx1aO35526 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stx1aO35526 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms