Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf3O08791 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.69□□□□□ -0.22
Ebf3O08791 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf3O08791 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.68□□□□□ -0.22
Ebf3O08791 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm11618-201ENSMUST00000117946 267 ntBASIC13.68□□□□□ -0.22
Ebf3O08791 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.68□□□□□ -0.22
Ebf3O08791 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm3961-201ENSMUST00000204425 994 ntBASIC13.68□□□□□ -0.22
Ebf3O08791 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Ebf3O08791 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ebf3O08791 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.68□□□□□ -0.22
Ebf3O08791 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf3O08791 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ebf3O08791 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.67□□□□□ -0.22
Ebf3O08791 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.67□□□□□ -0.22
Ebf3O08791 Gm7584-201ENSMUST00000175829 940 ntBASIC13.67□□□□□ -0.22
Ebf3O08791 Gm27243-201ENSMUST00000183964 521 ntBASIC13.67□□□□□ -0.22
Ebf3O08791 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.67□□□□□ -0.22
Ebf3O08791 Gm43118-201ENSMUST00000199149 775 ntBASIC13.67□□□□□ -0.22
Ebf3O08791 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ebf3O08791 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ebf3O08791 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ebf3O08791 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf3O08791 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf3O08791 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf3O08791 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.66□□□□□ -0.22
Ebf3O08791 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Ebf3O08791 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm25927-201ENSMUST00000175058 117 ntBASIC13.66□□□□□ -0.22
Ebf3O08791 Gm26927-201ENSMUST00000182385 965 ntBASIC13.66□□□□□ -0.22
Ebf3O08791 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.66□□□□□ -0.22
Ebf3O08791 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf3O08791 Gm42627-201ENSMUST00000197347 224 ntBASIC13.66□□□□□ -0.22
Ebf3O08791 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf3O08791 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms