Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Gm27680-201ENSMUST00000184192 160 ntBASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn20G5E8X0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn20G5E8X0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.45□□□□□ -0.58
Cldn20G5E8X0 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.45□□□□□ -0.58
Cldn20G5E8X0 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.45□□□□□ -0.58
Cldn20G5E8X0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn20G5E8X0 Gm29741-201ENSMUST00000192667 421 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms