Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Gm11531-201ENSMUST00000117614 555 ntBASIC15.8■□□□□ 0.12
NpcdF8VQB8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.8■□□□□ 0.12
NpcdF8VQB8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NpcdF8VQB8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Gm5070-201ENSMUST00000177599 862 ntBASIC15.79■□□□□ 0.12
NpcdF8VQB8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.79■□□□□ 0.12
NpcdF8VQB8 Gm5950-201ENSMUST00000213337 772 ntBASIC15.79■□□□□ 0.12
NpcdF8VQB8 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.79■□□□□ 0.12
NpcdF8VQB8 Gm8385-201ENSMUST00000058999 643 ntBASIC15.79■□□□□ 0.12
NpcdF8VQB8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NpcdF8VQB8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm23200-201ENSMUST00000104379 132 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm15547-201ENSMUST00000122152 333 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm14665-201ENSMUST00000122294 557 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm27046-201ENSMUST00000182160 463 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm5051-201ENSMUST00000204085 485 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 Gm44545-201ENSMUST00000208262 746 ntBASIC15.78■□□□□ 0.12
NpcdF8VQB8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NpcdF8VQB8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.77■□□□□ 0.12
NpcdF8VQB8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms