Protein–RNA interactions for Protein: F6XLV1

Crocc2, Ciliary rootlet coiled-coil, rootletin family member 2, mousemouse

Predictions only

Length 1,638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crocc2F6XLV1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crocc2F6XLV1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.46■□□□□ 0.87
Crocc2F6XLV1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Gm23119-201ENSMUST00000158610 140 ntBASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Mir6998-201ENSMUST00000183343 64 ntBASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Crocc2F6XLV1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Gm11509-201ENSMUST00000117358 325 ntBASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Gm11451-201ENSMUST00000118946 630 ntBASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 AC153954.1-201ENSMUST00000216959 255 ntBASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Crocc2F6XLV1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Gm24934-201ENSMUST00000103764 111 ntBASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Gm3332-201ENSMUST00000189337 928 ntBASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Gm43520-201ENSMUST00000197996 164 ntBASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Crocc2F6XLV1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Gm23218-201ENSMUST00000158124 276 ntBASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Gm6485-201ENSMUST00000160676 439 ntBASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Gm20392-201ENSMUST00000173047 701 ntBASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crocc2F6XLV1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Gm13394-201ENSMUST00000121658 1000 ntBASIC20.42■□□□□ 0.86
Crocc2F6XLV1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Gm5852-201ENSMUST00000194119 1021 ntBASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Gm5542-201ENSMUST00000195485 1089 ntBASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Crocc2F6XLV1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms