Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm9135-201ENSMUST00000182963 990 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col6a3E9PWQ3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm18801-201ENSMUST00000186616 536 ntBASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm13492-201ENSMUST00000119772 665 ntBASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a3E9PWQ3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm22846-201ENSMUST00000157706 270 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm807-202ENSMUST00000224929 408 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.75□□□□□ -0.37
Col6a3E9PWQ3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a3E9PWQ3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms