Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm26185-201ENSMUST00000157692 266 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm8885-201ENSMUST00000189382 598 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm9083-201ENSMUST00000120423 819 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm20426-201ENSMUST00000173657 440 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gm3096-201ENSMUST00000185770 364 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Morn2-202ENSMUST00000227729 656 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.09□□□□□ -0.63
Col6a4A2AX52 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a4A2AX52 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Col6a4A2AX52 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Col6a4A2AX52 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Gm2445-201ENSMUST00000182798 989 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.08□□□□□ -0.64
Col6a4A2AX52 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a4A2AX52 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.07□□□□□ -0.64
Col6a4A2AX52 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a4A2AX52 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms