Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.12□□□□□ -0.31
Ccdc194A0A140LIT1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc194A0A140LIT1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Gm24694-201ENSMUST00000180054 110 ntBASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Gm27663-201ENSMUST00000184839 110 ntBASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc194A0A140LIT1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc194A0A140LIT1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm14719-201ENSMUST00000121891 340 ntBASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm15376-201ENSMUST00000122258 783 ntBASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc194A0A140LIT1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc194A0A140LIT1 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms